yerH [2019-06-07 09:09:44]

unknown lipoprotein

locus: BSU06630

pI: 4.88

mw: 44.36 kDa

protein length: 396 aa

gene length: 1191 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 723,635 724,825

The protein

Structure

• [PDB|4HN3] (from Listeria monocytogenes, 45% identity)

[SW|Localization]

• cell membrane (according to Swiss-Prot)

Expression and Regulation

Operons

• genes: [gene|0BA7EC658F5C2397A90B68AC234D04966966561C|pcrB]-[gene|C73E52D214E24F21696973B19B0A44CE785D6FBA|pcrA]-[gene|03EFF93C1B0CE075AE068ECC4EDE9BE5D03C857E|ligA]-[gene|ADAE6B5C301959D90592A6F26DFE1690BF6F5552|yerH]
  description: [Pubmed|9701819]

  regulatory mechanism

  • [protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]: repression, [Pubmed|16267290], in [regulon|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA regulon]

  regulation

  • induced by DNA damage ([protein|search|LexA]) [Pubmed|16267290]

Biological materials

Mutant

• MGNA-B445 (yerH::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1444 NBRP B. subtilis, Japan]
• BKE06630 ([gene|ADAE6B5C301959D90592A6F26DFE1690BF6F5552|yerH]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE06630 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CTTTTTCAATAGAAAACACT, downstream forward: _UP4_TGATAGAAAACCCTTGTGCC
• BKK06630 ([gene|ADAE6B5C301959D90592A6F26DFE1690BF6F5552|yerH]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK06630 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CTTTTTCAATAGAAAACACT, downstream forward: _UP4_TGATAGAAAACCCTTGTGCC

References

• 16267290,9701819